CUTANA® Cloud: Easier Bioinformatics for CUT&RUN and CUT&Tag Analysis
CUTANA® Cloud: Easier Bioinformatics for CUT&RUN and CUT&Tag Analysis
Upload. Analyze. Discover.
CUTANA® Cloud is a web platform that simplifies bioinformatic analysis of CUT&RUN and CUT&Tag data. Designed for speed, security, and ease-of-use, it rapidly aligns raw sequencing files to quickly determine the success of an experiment.
Analysis of epigenomic data can be a major bottleneck, delaying experimental validation and slowing the path to biological insights. CUTANA® Cloud eliminates these challenges, providing an accessible solution for every researcher — no coding required.
- Results in as little as 90 minutes
- No coding required, intuitive interface
- Secure, enterprise-grade cloud infrastructure
- Automated workflows, built-in data visualization
- No Subscriptions, with pay-as-you-go pricing
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Try CUTANA® Cloud: Explore Sample Data for FREE
CUTANA® Cloud: Built for Every Researcher
CUTANA® Cloud solves many of the challenges faced by both bench biologists and data scientists.
The Cloud Workflow: From Data Upload to Discovery
CUTANA® Cloud guides you through four easy steps, all from your browser
- Choose from multiple options to upload raw FASTQ sequencing files. Save precious hard drive space by connecting directly to BaseSpace™ for seamless file transfers.
- Align sequencing reads to a reference genome, revealing where sequences are enriched across the genome. Customize parameters for your study and get an email notification when analysis completes.
- Call peaks to pinpoint genomic regions where aligned reads are significantly enriched over background, defining protein or histone mark-containing domains. Review QC reports to asses key metrics such as Fraction of Reads in Peaks (FRiP), a standard measure of signal-to-noise. Explore peak distributions across genomic features (e.g., promoters, exons, intergenic regions) to place results in biological context and qualitatively compare replicate datasets.
- Visualize and export your results with ease. Inspect peaks directly in the platform using the built-in genome browser (IGV), and generate publication-ready methods reports and QC summaries. Download complete datasets, reports, and visualization files for downstream analysis or sharing with collaborators.
Start Fast — No contracts, No subscriptions
Purchase credits to analyze data at your own pace.
Each credit covers one genome alignment for a CUT&RUN or CUT&Tag reaction (up to 20 million reads). Oversequenced? Each additional 20 million reads consumes an extra 0.25 credits.
Peak calling is included free of charge.